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	<title>graphical user interface Archives - Pharmacelera | Pushing the limits of computational chemistry</title>
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	<title>graphical user interface Archives - Pharmacelera | Pushing the limits of computational chemistry</title>
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		<title>New release out &#8211; 2025.01</title>
		<link>https://pharmacelera.com/blog/science/new-release-out-2025-01/</link>
		
		<dc:creator><![CDATA[Enric Herrero]]></dc:creator>
		<pubDate>Mon, 10 Feb 2025 10:40:07 +0000</pubDate>
				<category><![CDATA[Science]]></category>
		<category><![CDATA[Upgrades]]></category>
		<category><![CDATA[exascreen]]></category>
		<category><![CDATA[graphical user interface]]></category>
		<category><![CDATA[molxplore]]></category>
		<category><![CDATA[pharmqsar]]></category>
		<category><![CDATA[PharmScreen]]></category>
		<guid isPermaLink="false">https://pharmacelera.com/?p=14818</guid>

					<description><![CDATA[<p>We’re excited to announce the release of Pharmacelera’s 2025.01 software update!   What’s New in 2025.01?   &#x1f539; Custom Ultra-Large Library Generation [&#8230;]</p>
<p>The post <a href="https://pharmacelera.com/blog/science/new-release-out-2025-01/">New release out &#8211; 2025.01</a> appeared first on <a href="https://pharmacelera.com">Pharmacelera | Pushing the limits of computational chemistry</a>.</p>
]]></description>
										<content:encoded><![CDATA[<p style="margin: 0in; line-height: 19pt;">We’re excited to announce the release of Pharmacelera’s 2025.01 software update!</p>
<p style="margin: 0in; line-height: 19pt;"> </p>
<p style="margin: 0in; line-height: 19pt;"><b><u>What’s New in 2025.01?</u></b></p>
<p style="margin: 0in; line-height: 19pt;"> </p>
<p style="margin: 0in; line-height: 19pt;">&#x1f539; <b>Custom Ultra-Large Library Generation</b> – The new <b>exa</b><b>Screen</b>®<b>-intra</b> add-on allows you to generate <b>exa</b><b>Screen</b>®-compatible libraries from your own internal Building Blocks and chemical reactions.</p>
<p style="margin: 0in; line-height: 19pt;"> </p>
<p style="margin: 0in; line-height: 19pt;">&#x1f539; <b>Advanced Filtering Options</b> – <b>Pharm</b><b>Screen</b>® now supports enhanced substructure pattern matching, enabling more precise compound searches.</p>
<p style="margin: 0in; line-height: 19pt;"> </p>
<p style="margin: 0in; line-height: 19pt;">&#x1f539; <b>Boosted Performance &amp; Scalability</b> – Both <b>Pharm</b><b>Screen</b>® and <b>exa</b><b>Screen</b>® now support processors with hundreds of threads, delivering significantly faster results.</p>
<p style="margin: 0in; line-height: 19pt;"> </p>
<p style="margin: 0in; line-height: 19pt;">&#x1f539; <b>Updated Screening Libraries</b> – Our latest screening libraries now include:</p>
<ul type="disc">
<li style="color: #1c1c1c; mso-margin-top-alt: auto; mso-margin-bottom-alt: auto; text-align: justify; line-height: 19.0pt; mso-list: l0 level1 lfo1; tab-stops: list .5in;">Enamine Screening Collection </li>
<li style="color: #1c1c1c; mso-margin-top-alt: auto; mso-margin-bottom-alt: auto; text-align: justify; line-height: 19.0pt; mso-list: l0 level1 lfo1; tab-stops: list .5in;">Molport </li>
<li style="color: #1c1c1c; mso-margin-top-alt: auto; mso-margin-bottom-alt: auto; text-align: justify; line-height: 19.0pt; mso-list: l0 level1 lfo1; tab-stops: list .5in;">Enamine REAL Space (now featuring 70 billion compounds, screenable in under 7 hours, using less than 6 GB of storage).</li>
</ul>
<p style="margin: 0in; line-height: 19pt;">&#x1f539; <b>Expanded File Format Support</b> – Molecular field projections and QSAR model coefficients can now be exported in DX and GRD formats, ensuring compatibility with a wider range of visualizers.</p>
<p> </p>
<p style="margin: 0in; line-height: 19pt;">&#x1f539; <b>Pharm</b><b>QSAR</b>® <b>Integration in MolXplore</b> – You can now visualize <b>Pharm</b><b>QSAR</b>® models directly in MolXplore, making SAR analysis of QSAR coefficients more intuitive.</p>
<h2>Request your license</h2>
<p>			<iframe aria-label='Request a Trial' frameborder="0" style="height:900px;width:99%;border:none;" src='https://forms.zohopublic.com/virtualoffice17604/form/PharmScreenKnimeopinion/formperma/joj6Z1Od6Zg9zs82uQzUBz_HsGJOLWTf4BXle0jfTLg'></iframe></p>
<p>The post <a href="https://pharmacelera.com/blog/science/new-release-out-2025-01/">New release out &#8211; 2025.01</a> appeared first on <a href="https://pharmacelera.com">Pharmacelera | Pushing the limits of computational chemistry</a>.</p>
]]></content:encoded>
					
		
		
			</item>
		<item>
		<title>New Graphical User Interface: MolXplore</title>
		<link>https://pharmacelera.com/blog/science/molxplore/</link>
		
		<dc:creator><![CDATA[Fernando Martín]]></dc:creator>
		<pubDate>Thu, 11 Jan 2024 10:15:03 +0000</pubDate>
				<category><![CDATA[Science]]></category>
		<category><![CDATA[Upgrades]]></category>
		<category><![CDATA[exascreen]]></category>
		<category><![CDATA[graphical user interface]]></category>
		<category><![CDATA[molxplore]]></category>
		<category><![CDATA[PharmScreen]]></category>
		<guid isPermaLink="false">https://pharmacelera.com/?p=14413</guid>

					<description><![CDATA[<p>For some computational and medicinal chemists, a good graphical user interface (GUI) is essential. It makes it easier to analyze, understand and [&#8230;]</p>
<p>The post <a href="https://pharmacelera.com/blog/science/molxplore/">New Graphical User Interface: MolXplore</a> appeared first on <a href="https://pharmacelera.com">Pharmacelera | Pushing the limits of computational chemistry</a>.</p>
]]></description>
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							Fernando Martin						</h4>
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						<p>Pre & Post Sales Manager</p>
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									<p>For some computational and medicinal chemists, a good graphical user interface (GUI) is essential. It makes it easier to analyze, understand and draw conclusions from results. And that is what <strong>MolXplore</strong> is: a novel and modern GUI that helps scientists visualize the potential compound candidates of a virtual screening campaign, analyze the results using the different options available, and draw the right conclusions about which compounds should be prioritized for further analysis, such as performing a docking campaign or directly purchasing the molecules for in vitro assays.</p>								</div>
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															<img fetchpriority="high" decoding="async" width="600" height="338" src="https://pharmacelera.com/wp-content/uploads/2024/01/main_page.gif" class="attachment-large size-large wp-image-14423" alt="main page of molxplore animation" />															</div>
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									<p>In this first version of MolXplore, scientists will be able to analyse the results of <a href="https://pharmacelera.com/pharmscreen/">PharmScreen</a>, our 3D ligand-based virtual screening software, by loading the results and analysing them according to different options, such as evaluating the similarity of the candidates with respect to the reference molecule, superimposing the molecular fields and the chemical structures, or filtering the compounds according to different physicochemical properties, &#8230;</p>								</div>
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					<h2 class="elementor-heading-title elementor-size-default">Many ways to analyze your data</h2>				</div>
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									<p>There are many ways to interact with your results in MolXplore:</p><ul><li><strong>Molecular viewer</strong>: Here you can evaluate different properties of your compounds, such as the molecular fields for 7 different properties, different physicochemical descriptors, the 2D representation of the molecule or overlay your compounds on the reference molecule. You will find different ways to represent your compounds, such as line, sticks or ball &amp; stick.</li></ul>								</div>
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															<img decoding="async" width="295" height="211" src="https://pharmacelera.com/wp-content/uploads/2024/01/MolXplore_Hydrophobic_Fields.png" class="attachment-large size-large wp-image-14416" alt="" srcset="https://pharmacelera.com/wp-content/uploads/2024/01/MolXplore_Hydrophobic_Fields.png 295w, https://pharmacelera.com/wp-content/uploads/2024/01/MolXplore_Hydrophobic_Fields-230x165.png 230w" sizes="(max-width: 295px) 100vw, 295px" />															</div>
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									<ul><li><strong>Data table</strong>: This feature allows you to select, sort and filter the screened compounds based on various physicochemical properties. The table is synchronized with the molecular viewer to help you to make better decisions when selecting a compound as a candidate. The table also allows you also to group your compounds and download them in a single file.</li></ul>								</div>
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															<img loading="lazy" decoding="async" width="630" height="130" src="https://pharmacelera.com/wp-content/uploads/2024/01/MolXplore_Table.png" class="attachment-large size-large wp-image-14419" alt="" srcset="https://pharmacelera.com/wp-content/uploads/2024/01/MolXplore_Table.png 630w, https://pharmacelera.com/wp-content/uploads/2024/01/MolXplore_Table-300x62.png 300w, https://pharmacelera.com/wp-content/uploads/2024/01/MolXplore_Table-230x47.png 230w, https://pharmacelera.com/wp-content/uploads/2024/01/MolXplore_Table-350x72.png 350w, https://pharmacelera.com/wp-content/uploads/2024/01/MolXplore_Table-480x99.png 480w" sizes="(max-width: 630px) 100vw, 630px" />															</div>
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									<ul><li><strong>Property plot</strong>: The plot feature will help you to gain a deeper understanding of your compounds, plotting two different properties at the same time, helping to understand, for example, how your compounds may cluster based on two different selected properties. The plot feature is synchronized with the data table as well as the viewer, completing the list of tools for extracting conclusions from your screening.</li></ul>								</div>
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															<img loading="lazy" decoding="async" width="523" height="194" src="https://pharmacelera.com/wp-content/uploads/2024/01/MolXplore_Plot.png" class="attachment-large size-large wp-image-14420" alt="Property plot" srcset="https://pharmacelera.com/wp-content/uploads/2024/01/MolXplore_Plot.png 523w, https://pharmacelera.com/wp-content/uploads/2024/01/MolXplore_Plot-300x111.png 300w, https://pharmacelera.com/wp-content/uploads/2024/01/MolXplore_Plot-230x85.png 230w, https://pharmacelera.com/wp-content/uploads/2024/01/MolXplore_Plot-350x130.png 350w, https://pharmacelera.com/wp-content/uploads/2024/01/MolXplore_Plot-480x178.png 480w" sizes="(max-width: 523px) 100vw, 523px" />															</div>
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				<div class="elementor-widget-container">
									<p>The GUI is compatible with Linux and Windows, so you can analyze the results from any computer. MolXplore is included in your PharmScreen license. Request your license now!</p>								</div>
				</div>
					</div>
		</div>
					</div>
		</section>
				<section class="elementor-section elementor-top-section elementor-element elementor-element-f471b9e elementor-section-boxed elementor-section-height-default elementor-section-height-default" data-id="f471b9e" data-element_type="section" data-e-type="section">
						<div class="elementor-container elementor-column-gap-default">
					<div class="elementor-column elementor-col-100 elementor-top-column elementor-element elementor-element-0b09ea0" data-id="0b09ea0" data-element_type="column" data-e-type="column">
			<div class="elementor-widget-wrap elementor-element-populated">
						<div class="elementor-element elementor-element-484d627 elementor-widget elementor-widget-heading" data-id="484d627" data-element_type="widget" data-e-type="widget" data-widget_type="heading.default">
				<div class="elementor-widget-container">
					<h2 class="elementor-heading-title elementor-size-default">Request your license</h2>				</div>
				</div>
					</div>
		</div>
					</div>
		</section>
				<section class="elementor-section elementor-top-section elementor-element elementor-element-76a0a47 elementor-section-boxed elementor-section-height-default elementor-section-height-default" data-id="76a0a47" data-element_type="section" data-e-type="section">
						<div class="elementor-container elementor-column-gap-default">
					<div class="elementor-column elementor-col-100 elementor-top-column elementor-element elementor-element-44aa13c" data-id="44aa13c" data-element_type="column" data-e-type="column">
			<div class="elementor-widget-wrap elementor-element-populated">
						<div class="elementor-element elementor-element-1ce189d elementor-widget elementor-widget-html" data-id="1ce189d" data-element_type="widget" data-e-type="widget" data-widget_type="html.default">
				<div class="elementor-widget-container">
					<iframe aria-label='Request a Trial' frameborder="0" style="height:900px;width:99%;border:none;" src='https://forms.zohopublic.com/virtualoffice17604/form/PharmScreenKnimeopinion/formperma/joj6Z1Od6Zg9zs82uQzUBz_HsGJOLWTf4BXle0jfTLg'></iframe>				</div>
				</div>
					</div>
		</div>
					</div>
		</section>
				</div>
		<p>The post <a href="https://pharmacelera.com/blog/science/molxplore/">New Graphical User Interface: MolXplore</a> appeared first on <a href="https://pharmacelera.com">Pharmacelera | Pushing the limits of computational chemistry</a>.</p>
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